FastQCFastQC Report
Mon 25 Mar 2013
18.fq

Summary

[OK] Basic Statistics

Measure Value
Filename 18.fq
File type Conventional base calls
Encoding Illumina 1.5
Total Sequences 31686591
Filtered Sequences 0
Sequence length 49
%GC 50

[OK] Per base sequence quality

Per base quality graph

[OK] Per sequence quality scores

Per Sequence quality graph

[FAIL] Per base sequence content

Per base sequence content

[FAIL] Per base GC content

Per base GC content graph

[FAIL] Per sequence GC content

Per sequence GC content graph

[OK] Per base N content

N content graph

[OK] Sequence Length Distribution

Sequence length distribution

[FAIL] Sequence Duplication Levels

Duplication level graph

[FAIL] Overrepresented sequences

Sequence Count Percentage Possible Source
TAGCTTATCAGACTGATGTTGATGGAATTCTCGGGTGCCAAGGAACTCC 1834404 5.789212225448929 RNA PCR Primer, Index 1 (100% over 27bp)
AAGCTGCCAGTTGAAGAACTGTTGGAATTCTCGGGTGCCAAGGAACTCC 1779467 5.615836048756397 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGATTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 1714845 5.411894892700827 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGACTGGAATTCTCGGGTGCCAAGGAACTC 1623067 5.122251869884015 RNA PCR Primer, Index 1 (100% over 26bp)
TAGCTTATCAGACTGATGTTGACTTGGAATTCTCGGGTGCCAAGGAACT 1400632 4.420267235437223 RNA PCR Primer, Index 1 (100% over 25bp)
TTCACAGTGGCTAAGTTCCGTGGAATTCTCGGGTGCCAAGGAACTCCAG 473548 1.4944744292625232 RNA PCR Primer, Index 1 (100% over 29bp)
TTCAAGTAATCCAGGATAGGCTTGGAATTCTCGGGTGCCAAGGAACTCC 471885 1.489226152475664 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGATTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 440342 1.389679312615232 RNA PCR Primer, Index 1 (100% over 28bp)
TAGCTTATCAGACTGATGTTGTGGAATTCTCGGGTGCCAAGGAACTCCA 321014 1.0130909948627798 RNA PCR Primer, Index 1 (100% over 28bp)
CAACGGAATCCCAAAAGCAGCTGTGGAATTCTCGGGTGCCAAGGAACTC 270564 0.8538753821766437 RNA PCR Primer, Index 1 (100% over 26bp)
TAGCTTATCAGACTGATGTTGACATGGAATTCTCGGGTGCCAAGGAACT 268520 0.8474247040333245 RNA PCR Primer, Index 1 (100% over 25bp)
ACTGGACTTGGAGTCAGAAGGCTGGAATTCTCGGGTGCCAAGGAACTCC 254461 0.8030557783890353 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGTTTGTGCTGTTTGGAATTCTCGGGTGCCAAGGAACTCC 240626 0.7593937763768908 RNA PCR Primer, Index 1 (100% over 27bp)
CAAAGAATTCTCCTTTTGGGCTTGGAATTCTCGGGTGCCAAGGAACTCC 219436 0.6925200631396417 RNA PCR Primer, Index 1 (100% over 27bp)
AAGCTGCCAGTTGAAGAACTGTGGAATTCTCGGGTGCCAAGGAACTCCA 217501 0.6864133790851783 RNA PCR Primer, Index 1 (100% over 28bp)
TGAGGTAGTAGGTTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 207940 0.6562397324470783 RNA PCR Primer, Index 1 (100% over 27bp)
CCCATAAAGTAGAAAGCACTTGGAATTCTCGGGTGCCAAGGAACTCCAG 189554 0.5982151882479249 RNA PCR Primer, Index 1 (100% over 29bp)
TTCACAGTGGCTAAGTTCTGTGGAATTCTCGGGTGCCAAGGAACTCCAG 184091 0.5809744569871843 RNA PCR Primer, Index 1 (100% over 29bp)
AACATTCAACGCTGTCGGTGAGTTGGAATTCTCGGGTGCCAAGGAACTC 170432 0.5378678949717248 RNA PCR Primer, Index 1 (100% over 26bp)
TGAGGTAGTAGATTGTATAGTTATGGAATTCTCGGGTGCCAAGGAACTC 140777 0.4442794114393688 RNA PCR Primer, Index 1 (100% over 26bp)
TATTGCACTTGTCCCGGCCTGTTGGAATTCTCGGGTGCCAAGGAACTCC 139952 0.4416757864549077 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGACCTGGAATTCTCGGGTGCCAAGGAACT 138753 0.43789185147749093 RNA PCR Primer, Index 1 (100% over 25bp)
TTGAGAACTGAATTCCATAGGTTTGGAATTCTCGGGTGCCAAGGAACTC 126255 0.39844929989470945 RNA PCR Primer, Index 1 (100% over 26bp)
TGTAAACATCCCCGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT 117650 0.37129270232951217 RNA PCR Primer, Index 1 (100% over 25bp)
ACTGGACTTGGAGTCAGAAGGTGGAATTCTCGGGTGCCAAGGAACTCCA 111920 0.35320934334652787 RNA PCR Primer, Index 1 (100% over 28bp)
CACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCAC 103265 0.3258949503277269 RNA PCR Primer, Index 1 (100% over 33bp)
TGAGGTAGTAGGTTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 101960 0.3217764889886703 RNA PCR Primer, Index 1 (100% over 28bp)
ACTGGACTTGGAGTCAGAAGGCATGGAATTCTCGGGTGCCAAGGAACTC 99599 0.31432538766950346 RNA PCR Primer, Index 1 (100% over 26bp)
CCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACCA 92306 0.29130934280686743 RNA PCR Primer, Index 7 (100% over 35bp)
AACATTCAACGCTGTCGGTGAGTGGAATTCTCGGGTGCCAAGGAACTCC 82412 0.2600847784477668 RNA PCR Primer, Index 1 (100% over 27bp)
TGTAAACATCCTTGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT 80815 0.2550447916596645 RNA PCR Primer, Index 1 (100% over 25bp)
TTCAAGTAATTCAGGATAGGTTTGGAATTCTCGGGTGCCAAGGAACTCC 80335 0.25352995530506894 RNA PCR Primer, Index 1 (100% over 27bp)
ACTGGACTTGGAGTCAGAAGGCTTGGAATTCTCGGGTGCCAAGGAACTC 76900 0.2426894076424946 RNA PCR Primer, Index 1 (100% over 26bp)
CAAAGAATTCTCCTTTTGGGCTTTGGAATTCTCGGGTGCCAAGGAACTC 76179 0.2404139972015292 RNA PCR Primer, Index 1 (100% over 26bp)
TGTAAACATCCTCGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT 74030 0.23363194860564207 RNA PCR Primer, Index 1 (100% over 25bp)
TGAGGTAGTAGATTGTATAGTTTTGGAATTCTCGGGTGCCAAGGAACTC 70412 0.22221386958287812 RNA PCR Primer, Index 1 (100% over 26bp)
TTCACAGTGGCTAAGTTCCTGGAATTCTCGGGTGCCAAGGAACTCCAGT 67479 0.21295758827448494 RNA PCR Primer, Index 1 (100% over 30bp)
TGAGGTAGTAGTTTGTGCTGTTATGGAATTCTCGGGTGCCAAGGAACTC 67467 0.21291971736562004 RNA PCR Primer, Index 1 (100% over 26bp)
CATTGCACTTGTCTCGGTCTGATGGAATTCTCGGGTGCCAAGGAACTCC 66640 0.2103097805630148 RNA PCR Primer, Index 1 (100% over 27bp)
CACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACCAC 65787 0.20761779012453563 RNA PCR Primer, Index 30 (100% over 36bp)
AGCAGCATTGTACAGGGCTATGATGGAATTCTCGGGTGCCAAGGAACTC 62739 0.19799857927285391 RNA PCR Primer, Index 1 (100% over 26bp)
TATTGCACTTGTCCCGGCCTGTAATGGAATTCTCGGGTGCCAAGGAACT 61360 0.19364658066246382 RNA PCR Primer, Index 1 (100% over 25bp)
CAACAGCAGTCGATGGGCTGTTGGAATTCTCGGGTGCCAAGGAACTCCA 61114 0.1928702270307336 RNA PCR Primer, Index 1 (100% over 28bp)
CATAAAGTAGAAAGCACTACTTGGAATTCTCGGGTGCCAAGGAACTCCA 59938 0.1891588779619745 RNA PCR Primer, Index 1 (100% over 28bp)
ACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACC 57438 0.18126910528178938 RNA PCR Primer, Index 2 (100% over 34bp)
AGAGGTAGTAGGTTGCATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 55204 0.17421880441477594 RNA PCR Primer, Index 1 (100% over 27bp)
AGCTCGGTCTGAGGCCCCTCAGTTGGAATTCTCGGGTGCCAAGGAACTC 53278 0.16814052354196132 RNA PCR Primer, Index 1 (100% over 26bp)
TAGCAGCACGTAAATATTGGCGTGGAATTCTCGGGTGCCAAGGAACTCC 49948 0.15763134633195475 RNA PCR Primer, Index 1 (100% over 27bp)
TACCCATTGCATATCGGAGCTGTGGAATTCTCGGGTGCCAAGGAACTCC 47864 0.15105443182575243 RNA PCR Primer, Index 1 (100% over 27bp)
TTCACAGTGGCTAAGTTCTGGAATTCTCGGGTGCCAAGGAACTCCAGTC 47144 0.1487821772938591 RNA PCR Primer, Index 1 (100% over 31bp)
TAGCTTATCAGACTGATGTTTGGAATTCTCGGGTGCCAAGGAACTCCAG 45469 0.14349602959813507 RNA PCR Primer, Index 1 (100% over 29bp)
CACTAGATTGAGAGCTCCTGGAATGGAATTCTCGGGTGCCAAGGAACTC 43393 0.13694436236450933 RNA PCR Primer, Index 1 (100% over 26bp)
ATTCCACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAG 42951 0.1355494505546526 RNA PCR Primer, Index 1 (100% over 29bp)
AGCTACATCTGGCTACTGGGTCTCTGGAATTCTCGGGTGCCAAGGAACT 41567 0.1311816723989021 RNA PCR Primer, Index 1 (100% over 25bp)
TATTGCACTTGTCCCGGCCTGTATGGAATTCTCGGGTGCCAAGGAACTC 41310 0.13037060376737908 RNA PCR Primer, Index 1 (100% over 26bp)
AGAGGTAAAAAATTGATTTGACTTGGAATTCTCGGGTGCCAAGGAACTC 41004 0.12940489559132443 RNA PCR Primer, Index 1 (100% over 26bp)
CACTAGATTGAGAGCTCCTGGATGGAATTCTCGGGTGCCAAGGAACTCC 40739 0.1285685796872248 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGTTTGTACAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 39103 0.12340551244531164 RNA PCR Primer, Index 1 (100% over 27bp)
CATTGCACTTGTCTCGGTCTTGGAATTCTCGGGTGCCAAGGAACTCCAG 39076 0.12332030290036565 RNA PCR Primer, Index 1 (100% over 29bp)
ACTGGACTTGGAGTCAGAAGGATGGAATTCTCGGGTGCCAAGGAACTCC 37093 0.1170621352104428 RNA PCR Primer, Index 1 (100% over 27bp)
TCAGTGCACTACAGAACTTTGTTGGAATTCTCGGGTGCCAAGGAACTCC 36951 0.1166139961222083 RNA PCR Primer, Index 1 (100% over 27bp)
TTCAAGTAATCCAGGATAGGCTGGAATTCTCGGGTGCCAAGGAACTCCA 33894 0.1069663820888779 RNA PCR Primer, Index 1 (100% over 28bp)
AGAGGTAAAAAATTGATTTGACTGGAATTCTCGGGTGCCAAGGAACTCC 33215 0.10482351982893962 RNA PCR Primer, Index 1 (100% over 27bp)
ACTAGACCTAGCCCAAAGATACCCTTGGAATTCTCGGGTGCCAAGGAAC 33178 0.10470675119327288 RNA PCR Primer, Index 1 (100% over 24bp)
TATTGCACTTGTCCCGGCCTGTATTGGAATTCTCGGGTGCCAAGGAACT 32485 0.10251970620632556 RNA PCR Primer, Index 1 (100% over 25bp)
AGAGGTAGTAGGTTGCATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 31939 0.10079657985297315 RNA PCR Primer, Index 1 (100% over 28bp)
TGAGATGAAGCACTGTAGCTTGGAATTCTCGGGTGCCAAGGAACTCCAG 31868 0.10057251030885588 RNA PCR Primer, Index 1 (100% over 29bp)

[FAIL] Kmer Content

Kmer graph

Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position
TTCTC 32148140 28.551302 371.05847 28
AATTC 32429055 27.780132 358.51813 26
ATTCT 32202875 26.732883 347.40558 27
TGCCA 32785315 26.437258 335.54132 36
GCCAA 30469390 25.354187 346.76935 37
CCAAG 30423380 25.3159 346.8136 38
TCTCG 31917715 24.941349 326.35434 29
AACTC 25919440 24.512829 393.38132 44
GAACT 31598110 23.816574 313.65918 43
GAATT 32406290 22.124815 286.23248 25
CTCGG 31924265 21.949629 286.90613 30
ACTCC 21364440 21.616146 420.75558 45
GTGCC 30863610 21.220375 286.23514 35
CAAGG 30219820 20.0414 276.40945 39
GGAAC 29318735 19.443811 276.02426 42
GGAAT 32254330 19.375658 251.6213 24
TGGAA 32170460 19.32528 251.50903 23
AAGGA 30082545 18.647985 258.29697 40
AGGAA 29638930 18.372992 258.27856 41
TCGGG 31715935 17.379374 228.62488 31
CGGGT 31443565 17.230122 228.0498 32
GGTGC 31210305 17.102303 228.27493 34
GGGTG 31428625 13.725629 181.93939 33
CTCCA 12183545 12.327086 125.97311 45
TTGGA 14503380 8.442844 152.18639 22
TCCAG 10000935 8.064504 70.33498 45
CCAGT 9652095 7.7832074 77.8161 7
GACTG 8984170 5.7738476 174.89272 11
CAGTC 6784080 5.4705124 32.650303 43
TCAGA 7129655 5.373864 206.37859 8
TATCA 6176220 5.2908177 232.19865 6
CAGAC 6321685 5.2604003 225.86687 9
TTATC 6204220 5.1503687 225.02437 5
ACTGA 6756070 5.0922804 204.45671 12
TGATG 8723245 5.078058 157.94443 14
CTTAT 6090930 5.056322 224.3805 4
TGTTG 8697720 4.9065485 151.76775 17
CTGAT 6712335 4.9027853 198.1931 13
AGCTT 6647330 4.855305 196.7175 2
AGACT 6439565 4.8537197 204.77255 10
AGTCA 6391885 4.817782 30.523708 44
ATCAG 6341140 4.779533 204.76984 7
GTTGA 8102510 4.7167096 147.06163 18
CTGGA 7136310 4.586285 54.644157 23
TAGCT 6232170 4.5520663 196.39914 1
GCTTA 6112455 4.4646244 197.34085 3
ATGTT 6264300 4.1445184 179.28131 16
TCACC 4035120 4.08266 36.81922 45
GTCAC 4846770 3.9083142 32.676327 45
ATGGA 6386200 3.8362863 66.10704 22
GATGT 6458790 3.759852 157.92072 15
CTTGG 6024930 3.7522388 52.021362 23
CACCA 3571315 3.7287543 34.496902 45
GTGGA 6587790 3.3742511 24.655544 20
TTGAC 4370965 3.1926155 119.92121 19
ACCAC 2895630 3.0232823 28.256037 45
TGACT 3961900 2.8938286 105.286156 20
ACTTG 3817455 2.7883236 49.03342 22
GTAGT 4659635 2.7125108 94.92231 5
TAGTA 3873170 2.644338 111.19335 6
TTTGG 4638845 2.6168604 68.862915 21
AGTAG 4311155 2.5897756 97.63848 7
ACTGG 3847715 2.4728072 50.38289 22
TAGTT 3728805 2.4670115 91.03788 18
TTGTA 3509140 2.3216789 93.41891 13
AGGTA 3826255 2.2984889 98.5534 3
ATAGT 3295820 2.2501621 95.40344 17
AGAAC 2877265 2.237932 75.01619 15
CCACC 2003060 2.2374249 22.095966 45
TGTAT 3313405 2.192179 91.11323 14
GTATA 3160245 2.157601 92.64594 15
TATAG 3151710 2.1517737 92.295815 16
GTTTG 3799750 2.143511 66.02701 20
GTAGA 3549935 2.1324995 71.40994 8
CTGTT 3004470 2.126612 65.563934 19
AACTG 2815415 2.1220741 71.82386 17
GGTAG 4082575 2.0910857 82.73162 4
GTTGG 4207905 2.0885973 47.95549 21
ATTGT 3148105 2.082815 78.212875 12
AAGCT 2730990 2.0584402 72.47972 1
AGATT 2983455 2.0369005 80.49159 10
AAGAA 2790460 2.0287282 70.31807 14
GACTT 2760925 2.0166192 48.716373 21
TAGAT 2953700 2.0165858 80.36626 9
CTGCC 2331955 2.0117598 82.97443 4
AGTTG 3448260 2.0073338 56.106644 9
ACTGT 2732080 1.9955502 69.32899 18
TGAGG 3881230 1.9879575 79.24562 1
GAGGT 3878205 1.986408 82.92543 2
GATTG 3381750 1.9686164 69.41273 11
AGTTT 2969835 1.96487 67.62767 19
AGCTG 2920465 1.8768923 61.422306 2
CAGTT 2454520 1.7928164 70.388565 8
GCCAG 2448745 1.7373955 68.62073 6
TTGAA 2544560 1.7372531 66.15895 11
GATGG 3293700 1.6870259 49.625378 21
GCTGC 2255480 1.5507625 65.87392 3
TGAAG 2510725 1.5082302 58.06759 12
TTGAT 2268040 1.500556 57.60742 19
GAAGA 2375505 1.472561 59.72057 13
TGTGG 2866980 1.4230281 14.6312685 20
CGTGG 2513735 1.3774508 13.775054 19
GCTTG 2128135 1.3253715 23.545069 20
CACCG 1420325 1.2644235 13.061042 45
CCTGG 1746135 1.2005607 6.1020074 17
AGTGG 2334425 1.1956873 22.487215 6
TCACA 1235050 1.1680256 44.058388 2
CCGTG 1687160 1.1600122 16.240059 18
CTGTG 1860485 1.1586831 9.217935 21
AATCC 1198525 1.1334827 26.588985 8
GCTGT 1798645 1.1201701 13.620828 17
CATGG 1724180 1.108077 9.159715 23
GGCTT 1680430 1.0465474 25.014364 19
ACAGT 1376095 1.0372096 32.755325 4
CACAG 1228055 1.0218891 37.64854 3
GCACT 1261875 1.0175444 19.816511 5
TTCAA 1178570 1.0096141 28.772745 1
TCCCG 1150390 0.9924327 15.989515 12
CAGTG 1521855 0.97804904 28.170242 5
GTTCC 1237635 0.96712095 22.20838 15
TGGCT 1545855 0.9627361 27.585403 8
AGGCT 1474890 0.9478661 18.668846 18
TTCAC 1010780 0.926351 39.318665 1
ACCGG 1285770 0.9122596 8.670878 45
GGCTA 1398285 0.8986343 27.963795 9
GCTAA 1182990 0.8916599 34.341637 10
AAGTA 1242465 0.8753534 23.89158 4
CTAAG 1156720 0.8718592 33.078445 11
GCTGG 1578585 0.8650169 7.5091 21
CAGAA 1095760 0.8522803 24.812197 15
GGACT 1320790 0.8488307 21.100403 4
CACTT 906285 0.8305843 21.880188 6
AGTTC 1133095 0.82762885 31.150623 14
AAGTT 1180910 0.8062452 29.514809 13
GCCTG 1154365 0.79368734 12.575792 17
TAAGT 1152575 0.7869 29.898567 12
AACAT 888475 0.7854058 17.662354 5
TCCTT 881370 0.7827594 14.92799 11
CAAGT 1023580 0.7715071 25.589573 3
CCTGT 964250 0.75349057 13.795209 18
AGGAT 1249080 0.7503411 20.441467 13
CCGGA 1050220 0.7451358 6.2725506 45
CCAGG 1045550 0.7418224 20.100021 11
CAGGA 1107910 0.7347518 22.65741 12
TTCTG 1019435 0.72157246 10.511189 16
AAGCA 926550 0.72066903 11.172907 15
GTAAT 1039470 0.70967954 23.36446 6
CTCCT 716125 0.70214486 16.400398 10
AAAGC 901680 0.7013252 11.070039 14
ATCCC 689750 0.69787633 22.668062 8
GGCTG 1264410 0.6928584 7.2285743 20
TTGTG 1209605 0.6823611 10.490009 13
TTCCC 688075 0.6746424 5.2926826 6
ATAGG 1120630 0.67317927 20.922344 16
TGCTG 1069780 0.66624343 11.146129 16
GTGGC 1204775 0.66018033 24.743477 7
ATCCA 697705 0.65984154 26.286924 9
ATTGC 900340 0.65762115 18.4105 2
TGGAC 993295 0.6383599 20.654371 3
TCCGT 814940 0.6368158 18.32606 17
GTCAG 988675 0.63539076 20.699389 13
GGGCT 1158360 0.63474625 8.995158 18
AGTAA 897755 0.632495 23.878256 5
TCAAG 838880 0.6322924 25.369123 2
CCCAA 598750 0.6251456 16.330065 10
AGGTT 1071710 0.62387395 14.016989 10
TTGCA 853015 0.6230544 18.394173 3
TATGG 1067055 0.6211641 10.241751 22
CATTG 842030 0.6150307 7.1188984 6
TAATC 716485 0.6137721 24.055199 7
CAACG 735835 0.61230296 12.215108 7
ACATC 644345 0.60937726 19.127972 6
TAGGT 1046155 0.60899764 13.690615 9
GGCCT 885190 0.60861504 12.76954 16
TTTTG 949230 0.60858893 11.039108 14
TCGGT 974470 0.6068858 10.32022 15
GACCT 749400 0.6042974 5.502949 21
AGCAG 903155 0.598961 9.479706 16
TTCCG 759425 0.5934348 19.637508 16
TGCAC 727780 0.5868636 19.983643 4
GTTGT 1031925 0.58212847 11.577534 12
GGATA 968330 0.5816903 20.303513 14
GAGTC 889805 0.5718501 20.705463 11
TTTGT 886310 0.5682484 14.513221 12
CTTGT 802295 0.56787723 17.037857 8
ACCTG 698690 0.5634061 5.7228785 22
GAATC 746735 0.5628396 11.11396 6
TTGTC 794730 0.56252265 17.058716 9
CCGGC 740525 0.56210023 13.801486 14
AGAAG 892635 0.5533389 19.645147 16
GATAG 917820 0.55134827 20.484705 15
AGCAC 660125 0.54930323 10.3172245 15
TAGGC 853555 0.54855335 17.935379 17
TCTCC 556835 0.5459645 16.566298 9
CATCC 535715 0.5420266 20.235968 7
CCCAT 533155 0.5394364 12.561695 1
ACATT 626345 0.5365542 13.963779 2
CGGCC 697815 0.5296809 13.908192 15
CCCGG 697495 0.529438 13.773998 13
CCATA 558525 0.5282146 11.852941 2
GAAGG 998230 0.5276151 16.131458 17
CAAAG 677295 0.5267989 15.345891 1
CTGAA 696670 0.5251039 6.5570536 8
GTAAA 743030 0.5234867 13.821252 2
GTGCT 830625 0.5173012 11.103965 15
AAACA 566800 0.5170441 18.36716 4
GCAGC 728580 0.51693076 9.967325 17
AGCTC 634380 0.5115482 5.1098294 13
TGGAG 995025 0.50964963 16.618595 9
TAGAA 721710 0.50846606 10.344646 10
TATTG 765335 0.5063526 12.30574 1
CTGTC 647810 0.50621593 13.130635 12
AAAGT 716180 0.50456995 9.00658 6
GGTTG 1016385 0.5044836 12.036723 11
GGAGT 984570 0.5042945 16.59538 10
AGAAT 711510 0.50127983 11.950476 4
CCTTT 563050 0.5000541 14.880248 12
TAAAC 564220 0.49876666 17.803684 3
CCAAA 509720 0.49744874 13.735356 11
TGTAA 726635 0.49609712 13.446457 1
AAAGA 680150 0.49448463 12.148309 2
ATCCT 535740 0.49099043 11.166462 8
CTTTT 609495 0.4903119 13.4658575 13
TCCTG 626835 0.4898255 5.1282005 16
AAGGC 736545 0.48846734 14.62289 18
ACGGA 732465 0.48576146 10.27842 3
GTCCC 558320 0.4816584 15.792757 11
ATTCA 559830 0.47957465 14.000658 4
CTGTA 643450 0.46998504 6.2706304 19
TCCCA 463710 0.46917322 14.238685 9
TGAGA 769550 0.46228024 5.2122583 2
TCAAC 485300 0.45896345 14.228559 6
GTAGG 893490 0.4576436 12.273598 8
TGACA 604800 0.45585838 9.687437 20
CGGAA 684425 0.45390195 9.658141 4
GTCGG 825340 0.4522614 9.164255 14
CGCTG 649310 0.44643515 10.26472 10
TGGGC 813805 0.44594055 9.494088 17
TGAAT 651155 0.44456443 6.291038 9
ACATG 585515 0.44132257 9.826826 22
AACGC 529060 0.44024137 12.488558 8
GTTCT 614470 0.43493176 10.307407 15
TGTCC 554835 0.43356284 13.8289385 10
CAGCA 515780 0.4291908 8.258268 4
CACTA 453310 0.42870948 5.9222913 1
CATTC 462310 0.4236939 15.25186 3
CAGCT 523000 0.4217341 12.35242 18
TACAG 557155 0.41994667 5.935692 11
AGAAA 577135 0.41959035 9.262388 11
TCTGT 590210 0.41776007 7.8605375 17
CGACT 516050 0.4161298 10.767767 13
CAAAA 455645 0.41564673 13.213973 12
AAAAG 566250 0.4116767 10.449905 13
GAAAG 656130 0.40673092 8.039624 12
ATTCC 443660 0.40660176 7.277243 12
GAAGC 602610 0.39964333 10.023863 19
TGTTT 619460 0.39716032 9.327641 19
CCCCG 406420 0.3870783 7.994262 10
GACAT 511530 0.3855576 9.691167 21
ATAAA 463520 0.38299978 10.291164 4
CATAA 427680 0.37806618 10.930369 3
CCGAC 415005 0.36945212 8.036653 12
CGGTG 666370 0.3651506 9.104478 16
AACGG 549425 0.36437172 10.121016 2
TAAAG 513810 0.36199436 8.792965 5
CTACA 372205 0.35200596 6.518278 3
ACGCT 435460 0.35114405 11.893594 9
GTTAT 516665 0.34183028 8.579883 20
GGAAG 646560 0.34173962 8.4145975 18
TGTGC 543985 0.33878598 10.996804 14
TTATG 510320 0.33763236 8.591936 21
TTGGG 675505 0.3352875 8.674086 16
TGTCG 535695 0.33362308 10.242896 13
TCCCC 300360 0.32512304 9.025391 9
GATTT 476780 0.315442 5.092642 15
TCGAC 386950 0.3120268 5.569974 12
AGAGC 469360 0.3112736 5.078537 11
TGACC 384595 0.31012782 5.461233 20
ACAGG 465625 0.30879658 5.421024 12
TTCCA 335100 0.3071096 7.0888324 13
TGAGT 525475 0.3058945 7.7724156 19
GCTAC 377650 0.30452752 5.3827915 2
TCCAT 329335 0.30182615 7.3541303 14
CCTCG 342240 0.29524785 5.7814355 10
GGTGA 566085 0.28994745 7.3888206 17
GCATT 396205 0.28939378 5.7845263 5
AGCAT 378690 0.28543156 6.1130614 4
CTCGA 353815 0.28530756 5.6606607 11
CATAG 376890 0.2840748 9.519111 16
GTACA 375445 0.2829857 5.916874 10
GTGAG 517445 0.2650342 6.850919 18
TGTAC 362220 0.26457068 5.768825 9
GCTCC 300310 0.25907513 5.3906364 14
CCCGA 283105 0.25203007 7.4852047 11
GTCTC 317910 0.24842331 5.2113366 11
GAGAA 400480 0.24825509 5.165666 3
GAGTT 425955 0.24796095 5.233029 20
TTCAG 301005 0.21985835 5.046595 10
GCTAT 284370 0.2077079 5.39644 17
TACAT 229860 0.19690803 5.675749 4
AGTTA 278125 0.1898849 6.064445 19
TAGCA 219480 0.16542956 5.1703863 1